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Cheap Flights from Munich (MUC) to Naxos (JNX)

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Find the cheapest month or even day of the year to fly to Naxos

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Flight deals from Munich Airport to Naxos Airport

Looking for a cheap last-minute deal or the best return flight from Munich Airport to Naxos Airport? If you want to travel next month, return fares start from £246. Find the lowest prices on one-way and return tickets right here.
Naxos.£245 per passenger.Departing Tue, 21 Jul, returning Mon, 3 Aug.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Tue, 21 Jul, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Mon, 3 Aug, arriving in Munich.Price includes taxes and charges.From £245, select.
Naxos.£246 per passenger.Departing Tue, 14 Apr, returning Mon, 20 Apr.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Tue, 14 Apr, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Mon, 20 Apr, arriving in Munich.Price includes taxes and charges.From £246, select.
Naxos.£252 per passenger.Departing Tue, 25 Aug, returning Wed, 2 Sep.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Tue, 25 Aug, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Wed, 2 Sep, arriving in Munich.Price includes taxes and charges.From £252, select.
Naxos.£258 per passenger.Departing Sun, 20 Sep, returning Sun, 27 Sep.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Sun, 20 Sep, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Sun, 27 Sep, arriving in Munich.Price includes taxes and charges.From £258, select.
Naxos.£274 per passenger.Departing Mon, 3 Aug, returning Sat, 8 Aug.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Mon, 3 Aug, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Sat, 8 Aug, arriving in Munich.Price includes taxes and charges.From £274, select.
Naxos.£275 per passenger.Departing Tue, 21 Jul, returning Fri, 31 Jul.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Tue, 21 Jul, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Fri, 31 Jul, arriving in Munich.Price includes taxes and charges.From £275, select.
Naxos.£275 per passenger.Departing Thu, 11 Jun, returning Wed, 24 Jun.Return flight with SKY express and Aegean Airlines.Outbound indirect flight with SKY express, departs from Munich on Thu, 11 Jun, arriving in Naxos.Inbound indirect flight with Aegean Airlines, departs from Naxos on Wed, 24 Jun, arriving in Munich.Price includes taxes and charges.From £275, select.
Naxos.£309 per passenger.Departing Tue, 28 Apr, returning Tue, 5 May.Return flight with Lufthansa and SKY express.Outbound indirect flight with Lufthansa, departs from Munich on Tue, 28 Apr, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Tue, 5 May, arriving in Munich.Price includes taxes and charges.From £309, select.
Naxos.£310 per passenger.Departing Fri, 26 Jun, returning Wed, 15 Jul.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Fri, 26 Jun, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Wed, 15 Jul, arriving in Munich.Price includes taxes and charges.From £310, select.
Naxos.£311 per passenger.Departing Tue, 17 Mar, returning Tue, 24 Mar.Return flight with Lufthansa and Aegean Airlines.Outbound indirect flight with Lufthansa, departs from Munich on Tue, 17 Mar, arriving in Naxos.Inbound indirect flight with Aegean Airlines, departs from Naxos on Tue, 24 Mar, arriving in Munich.Price includes taxes and charges.From £311, select.
Naxos.£317 per passenger.Departing Sun, 10 May, returning Sun, 17 May.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Sun, 10 May, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Sun, 17 May, arriving in Munich.Price includes taxes and charges.From £317, select.
Naxos.£330 per passenger.Departing Fri, 9 Oct, returning Fri, 16 Oct.Return flight with Lufthansa and Aegean Airlines.Outbound indirect flight with Lufthansa, departs from Munich on Fri, 9 Oct, arriving in Naxos.Inbound indirect flight with Aegean Airlines, departs from Naxos on Fri, 16 Oct, arriving in Munich.Price includes taxes and charges.From £330, select.
Naxos.£367 per passenger.Departing Mon, 21 Sep, returning Thu, 15 Oct.Return flight with Aegean Airlines.Outbound indirect flight with Aegean Airlines, departs from Munich on Mon, 21 Sep, arriving in Naxos.Inbound indirect flight with Aegean Airlines, departs from Naxos on Thu, 15 Oct, arriving in Munich.Price includes taxes and charges.From £367, select.
Naxos.£407 per passenger.Departing Thu, 28 May, returning Wed, 3 Jun.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Munich on Thu, 28 May, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Wed, 3 Jun, arriving in Munich.Price includes taxes and charges.From £407, select.
Naxos.£439 per passenger.Departing Sun, 1 Nov, returning Sun, 8 Nov.Return flight with Lufthansa and Aegean Airlines.Outbound indirect flight with Lufthansa, departs from Munich on Sun, 1 Nov, arriving in Naxos.Inbound indirect flight with Aegean Airlines, departs from Naxos on Sun, 8 Nov, arriving in Munich.Price includes taxes and charges.From £439, select.
Naxos.£465 per passenger.Departing Sun, 29 Mar, returning Thu, 2 Apr.Return flight with Lufthansa and SKY express.Outbound indirect flight with Lufthansa, departs from Munich on Sun, 29 Mar, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Thu, 2 Apr, arriving in Munich.Price includes taxes and charges.From £465, select.

Find the cheapest month to fly from Munich to Naxos

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Munich to Naxos flights are currently cheapest in April.
Mar
from £311
Apr
from £246
May
from £317
Jun
from £275
Jul
from £275
Aug
from £274
Sep
from £258
Oct
from £330
Nov
from £439
Dec
Find prices
Jan
Find prices
Feb
Find prices

Munich to Naxos: Alternative routes

Compare routes from Munich to Naxos below. You may find an airport to fly into that's cheaper, faster, or easier than Naxos.

Naxos

0 miles from central Naxos
Closest
from £245
Search flights

Paros

15 miles from central Naxos
from £193
Search flights

Mykonos

23 miles from central Naxos
Cheapest
from £161
Search flights

Munich to Naxos: Flight information

The things to know before you go.
Cheapest flight found£245
Cheapest month to flyJuly

Check out these Naxos hotels

Ready to plan your stay? Other travellers rate these Naxos hotels for cleanliness, service and location.
Blue Paradise Apartments
0.55 miles from city centre
£75
Per night
Infinity Apartments
0.48 miles from city centre
£32
Per night
Naxian Horizon
0.13 miles from city centre
£51
Per night
Blue Paradise Apartments
0.55 miles from city centre
£75
Per night
Infinity Apartments
0.48 miles from city centre
£32
Per night
Naxian Horizon
0.13 miles from city centre
£51
Per night
Explore top-rated hotels

Finding cheap flights from Munich to Naxos: Frequently asked questions

The best price we found for a return flight from Munich to Naxos is £245. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
Currently, there are no airlines that fly direct from Munich to Naxos. But we found flights with one or more stops from £245.
As of March 2026, there are no flights flying from Munich to Naxos.
The cheapest month to fly from Munich to Naxos is usually July.
After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Munich Airport to Naxos Airport on Tuesday, 21 July 2026.
No airlines currently offer direct flights between Munich Airport and Naxos Airport. Most routes have one or more stops.
We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Naxos but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.
We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to Naxos is around 40 days in advance, so don’t leave your flight to the last minute.
Currently, SKY express offers the cheapest flight tickets to Naxos.

Travelling from Franz Josef Strauss Airport (MUC) to Naxos Airport (JNX): what you need to know

  • Arrive at the airport on time so you don't miss your MUC to JNX flight. Be there at least two hours ahead for international flights and an hour early for domestic departures to prevent a last-minute sprint to your gate.

  • Travelling during a peak month like April? Major public holidays and other high seasons can result in longer lines at security. Play it safe and arrive up to four hours before an international flight and two hours before domestic departures.

  • If you'd like to explore another city along the way, search for a flight with a stopover. To see your options for tickets from Franz Josef Strauss Airport to Naxos Airport, uncheck 'Direct flights only.' Eleftherios Venizelos International Airport is a sought-after stop between MUC and JNX.

How to find the cheapest flights from Franz Josef Strauss Airport (MUC) to Naxos Airport (JNX)

  • £137 is the lowest price for a one-way Franz Josef Strauss Airport to Naxos Airport flight. A return flight starts at £245. These prices can change depending on demand.

  • To score cheap tickets from MUC to JNX, book ahead. Airlines generally offer their most competitively priced fares when flights are first made available.

  • If you can be flexible with your travel dates, try using the 'Whole month' tool. It'll find the cheapest price in each month when looking for a flight from Franz Josef Strauss Airport to Naxos Airport.

  • Never miss a deal on cheap flights from MUC to JNX by setting up a Price Alert. You'll get an email or push notification on the app when fares go down.

  • Secure the right flight for you by using the filters. To see the 'Best,' 'Cheapest' or 'Fastest' flights from Franz Josef Strauss Airport to Naxos Airport, use the 'Sort by' tool. You can also filter results by airline, arrival and departure times, and journey duration.

Handy information about Franz Josef Strauss Airport (MUC)

  • When it comes to Franz Josef Strauss Airport's on-time performance, data shows 71.34% of flights stick to their scheduled arrival time.

  • To get to Franz Josef Strauss Airport from central Munich, it'll take about 35 minutes if you're travelling by car. This depends on traffic though. It's approximately 25 miles from the airport to the city centre.

  • You can expect a trip time of roughly 40 minutes on public transport.

  • Have an early flight from Franz Josef Strauss Airport to Naxos Airport? Avoid the stress of rushing to the airport (and get some extra shut-eye) by choosing one of these stays close to MUC:

Arriving at Naxos Airport (JNX)

  • If you're getting in on a late Franz Josef Strauss Airport to Naxos Airport flight, few things top the convenience of staying near the terminal. Grab your bags from the carousel and then be showered and snoozing soon after at one of these hotels near JNX:

  • Begin your adventure by picking up a Naxos Airport rental car. Grab your wheels from IDEA MOBILITY, Carwiz or Avance and experience the lesser-explored corners of Naxos and beyond.

  • To get the best deal, reserve your vehicle from Naxos Airport around one week before travelling.

Getting from Naxos Airport (JNX) to central Naxos

  • Naxos Airport is roughly 2 miles from central Naxos. The drive time takes around 5 minutes.

  • It takes around 40 minutes to get there by public transport.

When to fly to Naxos Airport (JNX)

  • The quietest month for a flight from Franz Josef Strauss Airport to Naxos Airport is January, while July is the most popular. Pick the best time to go to Naxos based on whether you prefer a bustling atmosphere or a more laid-back vibe.

  • When reserving your flight from Franz Josef Strauss Airport to Naxos Airport, think about the type of weather you enjoy. August is the warmest month in Naxos, with the temperature ranging from 23ºC (73ºF) to 28ºC (82ºF).

  • January has average temperatures of between 9ºC (48ºF) and 15ºC (59ºF). Search for cheap tickets from MUC to JNX sometime around then if you want to travel when it's cooler.

Explore more of Greece

  • Naxos has loads to offer, but there are so many other corners of Greece waiting to be discovered. Around 110 miles north-west of Naxos, a trip to Athens will fill your itinerary to the brim. Don't miss top attractions like Museum of the Centre for the Acropolis Studies, Acropolis of Athens and The Parthenon.

  • Thessaloniki is another must-experience destination in Greece and is around 280 miles north-west of Naxos. No trip is complete without seeing Arch of Galerius, Aristotelous Square and Museum of Byzantine Culture.

Plan the rest of your trip from Munich to Naxos

Prices shown on this page are estimated lowest prices only. Found in the last 45 days.